Join the social network of Tech Nerds, increase skill rank, get work, manage projects...
 
  • MPI_THREAD_MULTIPLE issues in C

    • 0
    • 0
    • 0
    • 0
    • 0
    • 0
    • 0
    • 528
    Answer it

    Has anyone ever used MPI_THREAD_MULTIPLE with thread intensive applications? All my applications hang and found that this MPI feature was only lightly tested and doesn't work in all cases. Does anyone have a workaround?

    Below is a simple application which fails to complete due to MPI:

    #include <mpi.h> 
    #include <stdio.h>
    #include <string.h>
    #include <stdlib.h>
    #include <stdarg.h>
    #include <pthread.h>
    #include <sys/time.h>
    
    #define NUM_CELLS 5		//Total number of integers to sort
    
    /* Initial process to create numbers and send to first cell */ 
    void *start(void *data)
    {
    	int i, num;
    	time_t t;
    	srand((unsigned) time(&t));
    
    	//Create array of random numbers and print
    	for(i = 0; i < NUM_CELLS; i++) 
    	{
    		num = rand() % 100;
        	printf("0 SEND\n");
    		MPI_Send(&num, 1, MPI_INT, 1, 1, MPI_COMM_WORLD); 
        	printf("0 SENT\n");
      }
      return NULL;
    }
    
    /* Process for individual sort cell in sort pump */
    void *sort_cell(void *data)
    {	
      	int *pos = (int *)data;
    
    	int num=2, i;
    	for(i = 0; i < NUM_CELLS; i++)
    	{
    		//Receive num
    		printf("%d WAIT\n", *pos);           
    		if(*pos == 1) 
    			  MPI_Recv(&num, 1, MPI_INT, 0, 1, MPI_COMM_WORLD, MPI_STATUS_IGNORE);
    		else if(*pos == 2)
    			  MPI_Recv(&num, 1, MPI_INT, 1, 2, MPI_COMM_WORLD, MPI_STATUS_IGNORE);
    		else if(*pos == 3)
    			  MPI_Recv(&num, 1, MPI_INT, 2, 3, MPI_COMM_WORLD, MPI_STATUS_IGNORE);
    		else if(*pos == 4)
    			  MPI_Recv(&num, 1, MPI_INT, 3, 4, MPI_COMM_WORLD, MPI_STATUS_IGNORE);
    		else if(*pos == 5)
    			  MPI_Recv(&num, 1, MPI_INT, 4, 5, MPI_COMM_WORLD, MPI_STATUS_IGNORE);
    		printf("%d RECV\n", *pos);
    			
    		//Send number to next cell
    		printf("%d SEND\n", *pos); 
    		if(*pos == 1)
    		  MPI_Send(&num, 1, MPI_INT, 2, 2, MPI_COMM_WORLD);    
    		else if(*pos == 2)
    		  MPI_Send(&num, 1, MPI_INT, 3, 3, MPI_COMM_WORLD);
    		else if(*pos == 3) 
    		  MPI_Send(&num, 1, MPI_INT, 4, 4, MPI_COMM_WORLD);    
    		else if(*pos == 4) 
    		  MPI_Send(&num, 1, MPI_INT, 1, 5, MPI_COMM_WORLD);
    		printf("%d SENT\n", *pos);
      }	
      return NULL;
    }
    
    int main(int argc, char **argv)
    {
       int i;
       double elapsedTime;
       struct timeval t1, t2;
    
       //Start timer
       gettimeofday(&t1, NULL);
    
       int my_rank, provided; 
       MPI_Init_thread(&argc, &argv, MPI_THREAD_MULTIPLE, &provided);	
       MPI_Comm_rank(MPI_COMM_WORLD, &my_rank);
    	
       //Stop timer
       gettimeofday(&t2, NULL);
    
       elapsedTime = (t2.tv_sec - t1.tv_sec) * 1000.0;      //sec to ms
       elapsedTime += (t2.tv_usec - t1.tv_usec) / 1000.0;   //us to ms
    
       printf("Rank %d - Setup time: %f milliseconds\n", my_rank, elapsedTime);
    
       //Start timer
       gettimeofday(&t1, NULL);
    
      //Execute processes in parallel
      if(my_rank == 0)
      {
        int num_threads = 1;
        
        pthread_t threads[num_threads];
        
        pthread_create(&threads[0], NULL, start, NULL);
        
        for(i = 0; i < num_threads; i++)
        	(void) pthread_join(threads[i], NULL); 
      }
      if(my_rank == 1)
      {
    	int pos = 1;
        int num_threads = 2;
        
        pthread_t threads[num_threads];
        
        pthread_create(&threads[0], NULL, sort_cell, (void *) &pos);
    
    	int pos1 = 5;
        pthread_create(&threads[1], NULL, sort_cell, (void *) &pos1);
        
        for(i = 0; i < num_threads; i++)
        	(void) pthread_join(threads[i], NULL); 
      }
    
      if(my_rank == 2)
      {
    	int pos = 2;
        int num_threads = 1;
        
        pthread_t threads[num_threads];
        
        pthread_create(&threads[0], NULL, sort_cell, (void *) &pos);
        
        for(i = 0; i < num_threads; i++)
        	(void) pthread_join(threads[i], NULL);
      }
    
      if(my_rank == 3)
      {
    	int pos = 3;
        int num_threads = 1;
        
        pthread_t threads[num_threads];
        
        pthread_create(&threads[0], NULL, sort_cell, (void *) &pos);
        
        for(i = 0; i < num_threads; i++)
        	(void) pthread_join(threads[i], NULL);
      }
    
      if(my_rank == 4)
      {
    	int pos = 4;
        int num_threads = 1;
        
        pthread_t threads[num_threads];
        
        pthread_create(&threads[0], NULL, sort_cell, (void *) &pos);
        
        for(i = 0; i < num_threads; i++)
        	(void) pthread_join(threads[i], NULL);
      }
    
      MPI_Barrier(MPI_COMM_WORLD);
    
       //Stop timer
      gettimeofday(&t2, NULL);
    
       elapsedTime = (t2.tv_sec - t1.tv_sec) * 1000.0;      //sec to ms
      elapsedTime += (t2.tv_usec - t1.tv_usec) / 1000.0;   //us to ms
    
       printf("Rank %d - Execution time: %f milliseconds\n", my_rank, elapsedTime);
    
       MPI_Finalize();
    	
       return 0;
    }
    

    :

 0 Answer(s)

Sign In
                           OR                           
                           OR                           
Register

Sign up using

                           OR                           
Forgot Password
Fill out the form below and instructions to reset your password will be emailed to you:
Reset Password
Fill out the form below and reset your password: